Peiyi He bio photo

Ph.D. student
EEE department
University of Hong Kong

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1. Real-time raw signal genomic analysis with in-memory computing

Nanopore genomic analysis typically requires two computationally intensive steps: basecalling and read mapping, both demanding frequent and costly data movement on Von Neumann hardware.


This work inroduced a memristor-based hardware-software co-design, that directly analyze the raw signals using in-memory computing hardware, effectively combining separate basecalling and read mapping.


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